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BaseInfo

ncRNA ID novel_gar_miR1108
Species Gossypium arboreum
Class miRNA
Genome position Chr7:116433226-116433275 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180715;SRR3180720
Length 21
Mature sequence(if miRNA) 1 - UCAUGGUCUUUAGCUGCGUUU - 21
Stem-loop(if miRNA) --   U GU       U       U
  UCA G  CUUUAGC GCGUUUU A
  ||| |  ||||||| |||||||
  GGU C  GAAAUCG CGCGAAA G
CU   C UG       C       A
Stem-loop sequence UCAUGGUCUUUAGCUGCGUUUUUAGAAAAGCGCCGCUAAAGGUCCUGGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017768625.1
ncRNA:21   UUUGCGUCGAUUUCUGGUACU   1
  *|||||*||||||*|||||||
targets:43   UAACGCUGCUAAAAACCAUGA   63

2.5 PREDICTED: Gossypium arboreum 26S proteasome non-ATPase regulatory subunit 2 homolog A-like (LOC108467830), mRNA 26S proteasome non-ATPase regulatory subunit 2 homolog A-like(LOC108467830) coding protein psRNATarget