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BaseInfo

ncRNA ID novel_gar_miR1104
Species Gossypium arboreum
Class miRNA
Genome position Chr7:79084977-79085170 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180715
Length 24
Mature sequence(if miRNA) 1 - AAGAAUUGUAUGAAAUAAGAACGU - 24
Stem-loop(if miRNA) --AAGA  UG         -   AC        AUUUGUAUCUA    C      U            AA      C   GCAU    AUCUUAAAAAAUUAAA
      AU  UAUGAAAUA AGA  GUUAUGUU           UUUU AAUAGU UAAUGUUAUAUC  UAUUUU AUC    UUUU                U
      ||  ||||||||| |||  ||||||||           |||| |||||| ||||||||||||  |||||| |||    ||||
      UA  AUACUUUAU UCU  CAAUAUAG           AAAA UUAUUA AUUACAAUAUAG  AUAAAA UAG    UUAA                U
UUUUUA  GU         C   -A        -----------    A      C            CC      A   -AAC    AAUCUUUAAAUUAAAA
Stem-loop sequence AAGAAUUGUAUGAAAUAAGAACGUUAUGUUAUUUGUAUCUAUUUUCAAUAGUUUAAUGUUAUAUCAAUAUUUUCAUCGCAUUUUUAUCUUAAAAAAUUAAAUUAAAAUUAAAUUUCUAAAAUUCAAGAUAAAAAUACCGAUAUAACAUUACAUUAUUAAAAAGAUAUAACAUCUCUAUUUCAUAUGAUAUUUUU