ncRNA ID | novel_gar_miR1104 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr7:79084977-79085170 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180715 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAGAAUUGUAUGAAAUAAGAACGU - 24 |
Stem-loop(if miRNA) |
--AAGA  UG         -   AC        AUUUGUAUCUA    C      U            AA      C   GCAU    AUCUUAAAAAAUUAAA       AU  UAUGAAAUA AGA  GUUAUGUU           UUUU AAUAGU UAAUGUUAUAUC  UAUUUU AUC    UUUU                U       ||  ||||||||| |||  ||||||||           |||| |||||| ||||||||||||  |||||| |||    ||||       UA  AUACUUUAU UCU  CAAUAUAG           AAAA UUAUUA AUUACAAUAUAG  AUAAAA UAG    UUAA                U UUUUUA  GU         C   -A        -----------    A      C            CC      A   -AAC    AAUCUUUAAAUUAAAA |
Stem-loop sequence | AAGAAUUGUAUGAAAUAAGAACGUUAUGUUAUUUGUAUCUAUUUUCAAUAGUUUAAUGUUAUAUCAAUAUUUUCAUCGCAUUUUUAUCUUAAAAAAUUAAAUUAAAAUUAAAUUUCUAAAAUUCAAGAUAAAAAUACCGAUAUAACAUUACAUUAUUAAAAAGAUAUAACAUCUCUAUUUCAUAUGAUAUUUUU |