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BaseInfo

ncRNA ID	novel_gar_miR1099
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr1:134948779-134948951 [+]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR1029588;SRR1029587
Length	24
Mature sequence(if miRNA)	150 - AAAGGACUAGUUUGCUCUUUGAUC - 173
Stem-loop(if miRNA)	--    U                -C      C     A   CAA      U   A     UUA  UUUAGACGUCAACAUAAGAUGCA   UUAA GAGCAAACUGGUCUUU  UAUUAA AAUUU AUC   UUUUAC GUU AAAAU   UC                       C   |||| ||||||||||||||||  |||||| ||||| |||   |||||| ||| |||||   ||                       G   AGUU CUCGUUUGAUCAGGAA  AUAAUU UUAAA UAG   AAGAUG CAA UUUUA   CG                       U CU    U                AU      -     G   UUA      U   C     --U  GUUUAUCAAUGUGUAUCGUACGG
Stem-loop sequence	UUAAUGAGCAAACUGGUCUUUCUAUUAACAAUUUAAUCCAAUUUUACUGUUAAAAAUUUAUCUUUAGACGUCAACAUAAGAUGCACGUGGCAUGCUAUGUGUAACUAUUUGGCUAUUUUCAACUGUAGAAAUUGAUGAAAUUUUAAUAUAAAGGACUAGUUUGCUCUUUGAUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017752094.1	ncRNA:24   CUAGUUUCUCGUUUGAUCAGGAAA   1   ||||||||||=|||=||||||||| targets:1119   GAUCAAAGAGUAAAUUAGUCCUUU   1142 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum universal stress protein PHOS32-like (LOC108453792), transcript variant X3, mRNA	universal stress protein PHOS32-like(LOC108453792)	coding protein	psRNATarget