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BaseInfo

ncRNA ID	novel_gar_miR1094
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr1:13715471-13715582 [+]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR1029588;SRR1029587
Length	24
Mature sequence(if miRNA)	1 - UGAGACAAGGAAGAGUGAAUGGUC - 24
Stem-loop(if miRNA)	--     C             U  UC     ----       --AA   A    A    A   UGAGA AAGGAAGAGUGAA GG  AAAAU    GUUAGGU    GUG UGUU UAUU U   ||||| ||||||||||||| ||  |||||    |||||||    ||| |||| ||||   AUUUU UUCUUUCUUAUUU UC  UUUUA    CGAUCCG    CAU AUAA AUAG G CC     -             -  UU     CCAU       AAUC   A    A    U
Stem-loop sequence	UGAGACAAGGAAGAGUGAAUGGUCAAAAUGUUAGGUAAGUGAUGUUAUAUUAUGUGAUAAAAUAAUACCUAAGCCUAGCUACCAUUUUUUCUUUUAUUCUUUCUUUUUUACC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017771368.1	ncRNA:24   CUGGUAAGUGAGAAGGAACAGAGU   1   *|**||||=|||||||||||=||| targets:289   AAGGAUUCGCUCUUCCUUGUUUCA   312 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum glycerol-3-phosphate acyltransferase, chloroplastic-like (LOC108470134), transcript variant X2, mRNA	glycerol-3-phosphate acyltransferase, chloroplastic-like(LOC108470134)	coding protein	psRNATarget
XM_017771367.1	ncRNA:24   CUGGUAAGUGAGAAGGAACAGAGU   1   *|**||||=|||||||||||=||| targets:289   AAGGAUUCGCUCUUCCUUGUUUCA   312 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum glycerol-3-phosphate acyltransferase, chloroplastic-like (LOC108470134), transcript variant X1, mRNA	glycerol-3-phosphate acyltransferase, chloroplastic-like(LOC108470134)	coding protein	psRNATarget
XM_017771369.1	ncRNA:24   CUGGUAAGUGAGAAGGAACAGAGU   1   *|**||||=|||||||||||=||| targets:286   AAGGAUUCGCUCUUCCUUGUUUCA   309 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum glycerol-3-phosphate acyltransferase, chloroplastic-like (LOC108470134), transcript variant X4, mRNA	glycerol-3-phosphate acyltransferase, chloroplastic-like(LOC108470134)	coding protein	psRNATarget