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BaseInfo

ncRNA ID novel_gar_miR1091
Species Gossypium arboreum
Class miRNA
Genome position Chr11:41265505-41265553 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588;SRR3180720
Length 24
Mature sequence(if miRNA) 1 - AAUACUCUGUAACCCUGUUUCGGC - 24
Stem-loop(if miRNA) --        G      UGU    G
  AAUACUCU UAACCC   UUCG C
  |||||||| ||||||   ||||
  UUAUGGGG AUUGGG   AGGC A
CA        -      CUU    A
Stem-loop sequence AAUACUCUGUAACCCUGUUUCGGCAACGGAUUCGGGUUAGGGGUAUUAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017761879.1
ncRNA:24   CGGCUUUGUCCCAAUGUCUCAUAA   1
  *|=*=||=||||||||||||||||
targets:1835   ACUAGAAUAGGGUUACAGAGUAUU   1858

1.0 PREDICTED: Gossypium arboreum cytochrome P450 CYP749A22-like (LOC108461902), mRNA cytochrome P450 CYP749A22-like(LOC108461902) coding protein psRNATarget