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BaseInfo

ncRNA ID novel_gar_miR1090
Species Gossypium arboreum
Class miRNA
Genome position Chr11:40819756-40819865 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588
Length 24
Mature sequence(if miRNA) 87 - GCUAUAGGUCGAUCAGUAGCGGCG - 110
Stem-loop(if miRNA) --       A      G AU        C    U  C         G    A  U
  CCGCUAU GAUCGA C  UAGCAGCG UUUU UA AAAAACGCC CUAU GG C
  ||||||| |||||| |  |||||||| |||| || ||||||||| |||| ||
  GGCGAUG CUAGCU G  AUCGUCGC AAAA AU UUUUUGCGG GAUG CU G
GC       A      G AU        A    C  U         A    A  A
Stem-loop sequence CCGCUAUAGAUCGAGCAUUAGCAGCGCUUUUUUACAAAAACGCCGCUAUAGGUCGAUCAGUAGAGGCGUUUUUUUACAAAAACGCUGCUAUAGGUCGAUCAGUAGCGGCG