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BaseInfo

ncRNA ID novel_gar_miR1085
Species Gossypium arboreum
Class miRNA
Genome position Chr1:13020331-13020461 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588
Length 24
Mature sequence(if miRNA) 1 - UCCUGGAAGCAGACCUAUGGAAAG - 24
Stem-loop(if miRNA) --     -G                      --               --------------     AA    G
  UCCUG  AAGCAGACCUAUGGAAAGAAAA  AUAAUGUUUUCCAUU              CUUCU  AGAU G
  |||||  ||||||||||||||||||||||  |||||||||||||||              |||||  ||||
  AGGAU  UUCGUCUGGAUACCUUUCUUUU  UAUUAUAAAAGGUAG              GGGGA  UUUA A
AG     GG                      UU               UAAGAUAAAAAGAU     AG    A
Stem-loop sequence UCCUGGAAGCAGACCUAUGGAAAGAAAAAUAAUGUUUUCCAUUCUUCUAAAGAUGGAAAUUUGAAGGGGUAGAAAAAUAGAAUGAUGGAAAAUAUUAUUUUUUUCUUUCCAUAGGUCUGCUUGGUAGGAGA