ncRNA ID | novel_gar_miR1084 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr1:118986847-118986902 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUCCAGUUGGGCAUACUUUCUGCA - 24 |
Stem-loop(if miRNA) |
--   C GU      UA     UGCACA   AUC A  UGGGCA  CUUUC      G   ||| |  ||||||  |||||   UAG U  ACUCGU  GAAAG      U AG   A UG      GC     UAUAAU |
Stem-loop sequence | AUCCAGUUGGGCAUACUUUCUGCACAGUUAAUAUGAAAGCGUGCUCAGUUAGAUGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017779710.1 |
|
2.5 | PREDICTED: Gossypium arboreum ABC transporter G family member 38 (LOC108477222), mRNA | ABC transporter G family member 38(LOC108477222) | coding protein | psRNATarget |