ncRNA ID | novel_gar_miR1083 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr11:33580549-33580713 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588 |
Length | 21 |
Mature sequence(if miRNA) | 145 - AAGAAGACUAAUUUGCUCUUU - 165 |
Stem-loop(if miRNA) |
--                 --CUA      A          C     UG        UG  UCAU   C UU        G     G   AGAGCAAAUUGGUCUUU     UUGAAA UUUCAUCCAU UCUAU  UUAAAAAC  GC    GUA G  UGAAAGAG UAACU C   |||||||||||||||||     |||||| |||||||||| |||||  ||||||||  ||    ||| |  |||||||| |||||   UCUCGUUUAAUCAGAAG     AAUUUU GAAGUAGGUA AGAUG  AAUUUUUG  UG    UAU C  ACUUUUUU AUUGG C UU                 AAAAC      A          A     GU        GU  ----   - -U        -     U |
Stem-loop sequence | AGAGCAAAUUGGUCUUUCUAUUGAAAAUUUCAUCCAUCUCUAUUGUUAAAAACUGGCUCAUGUACGUUUGAAAGAGGUAACUGCCUGGUUAUUUUUUCAUCUAUGUUGGUUUUUAAUGGUAGAAAUGGAUGAAGAUUUUAACAAAAGAAGACUAAUUUGCUCUUU |