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BaseInfo

ncRNA ID novel_gar_miR1083
Species Gossypium arboreum
Class miRNA
Genome position Chr11:33580549-33580713 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588
Length 21
Mature sequence(if miRNA) 145 - AAGAAGACUAAUUUGCUCUUU - 165
Stem-loop(if miRNA) --                 --CUA      A          C     UG        UG  UCAU   C UU        G     G
  AGAGCAAAUUGGUCUUU     UUGAAA UUUCAUCCAU UCUAU  UUAAAAAC  GC    GUA G  UGAAAGAG UAACU C
  |||||||||||||||||     |||||| |||||||||| |||||  ||||||||  ||    ||| |  |||||||| |||||
  UCUCGUUUAAUCAGAAG     AAUUUU GAAGUAGGUA AGAUG  AAUUUUUG  UG    UAU C  ACUUUUUU AUUGG C
UU                 AAAAC      A          A     GU        GU  ----   - -U        -     U
Stem-loop sequence AGAGCAAAUUGGUCUUUCUAUUGAAAAUUUCAUCCAUCUCUAUUGUUAAAAACUGGCUCAUGUACGUUUGAAAGAGGUAACUGCCUGGUUAUUUUUUCAUCUAUGUUGGUUUUUAAUGGUAGAAAUGGAUGAAGAUUUUAACAAAAGAAGACUAAUUUGCUCUUU