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BaseInfo

ncRNA ID novel_gar_miR1078
Species Gossypium arboreum
Class miRNA
Genome position Chr11:27164855-27165068 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588;SRR1029586
Length 24
Mature sequence(if miRNA) 1 - AUGAUUAUAUGAAACAGUGACGCC - 24
Stem-loop(if miRNA) ----AU    A                                                  - -                           U      A      UUUG
      GAUU UAUGAAACAGUGACGCCACGUCAUCUGUAUCCCUUUCCAAUAGUUUUAUG C CAUCAGUAUUCUUAUCCUGAAUUUCAG AUUUUA UUUGGA    A
      |||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||| ||||||
      CUAA AUACUUUGUCACUGCGGUGCAGUAGACAUAGGGAAAGGUUAUCAAAAUAC G GUAGUCAUAAGAAUAGGACUUAAAGUC UAAAAU AGACUU    U
CUUUUC    C                                                  A U                           C      A      UUUU
Stem-loop sequence AUGAUUAUAUGAAACAGUGACGCCACGUCAUCUGUAUCCCUUUCCAAUAGUUUUAUGCCAUCAGUAUUCUUAUCCUGAAUUUCAGUAUUUUAAUUUGGAUUUGAUUUUUUUCAGAAUAAAAUCCUGAAAUUCAGGAUAAGAAUACUGAUGUGACAUAAAACUAUUGGAAAGGGAUACAGAUGACGUGGCGUCACUGUUUCAUACAAUCCUUUUC