ncRNA ID | novel_gar_miR1078 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr11:27164855-27165068 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588;SRR1029586 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUGAUUAUAUGAAACAGUGACGCC - 24 |
Stem-loop(if miRNA) |
----AU    A                                                  - -                           U      A      UUUG       GAUU UAUGAAACAGUGACGCCACGUCAUCUGUAUCCCUUUCCAAUAGUUUUAUG C CAUCAGUAUUCUUAUCCUGAAUUUCAG AUUUUA UUUGGA    A       |||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||| ||||||       CUAA AUACUUUGUCACUGCGGUGCAGUAGACAUAGGGAAAGGUUAUCAAAAUAC G GUAGUCAUAAGAAUAGGACUUAAAGUC UAAAAU AGACUU    U CUUUUC    C                                                  A U                           C      A      UUUU |
Stem-loop sequence | AUGAUUAUAUGAAACAGUGACGCCACGUCAUCUGUAUCCCUUUCCAAUAGUUUUAUGCCAUCAGUAUUCUUAUCCUGAAUUUCAGUAUUUUAAUUUGGAUUUGAUUUUUUUCAGAAUAAAAUCCUGAAAUUCAGGAUAAGAAUACUGAUGUGACAUAAAACUAUUGGAAAGGGAUACAGAUGACGUGGCGUCACUGUUUCAUACAAUCCUUUUC |