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BaseInfo

ncRNA ID	novel_gar_miR1077
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr11:27164899-27165022 [+]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR1029588
Length	24
Mature sequence(if miRNA)	101 - CUGAUGUGACAUAAAACUAUUGGA - 124
Stem-loop(if miRNA)	--             - -                           U      A      UUUG   CAAUAGUUUUAUG C CAUCAGUAUUCUUAUCCUGAAUUUCAG AUUUUA UUUGGA    A   ||||||||||||| | ||||||||||||||||||||||||||| |||||| ||||||   GUUAUCAAAAUAC G GUAGUCAUAAGAAUAGGACUUAAAGUC UAAAAU AGACUU    U AG             A U                           C      A      UUUU
Stem-loop sequence	CAAUAGUUUUAUGCCAUCAGUAUUCUUAUCCUGAAUUUCAGUAUUUUAAUUUGGAUUUGAUUUUUUUCAGAAUAAAAUCCUGAAAUUCAGGAUAAGAAUACUGAUGUGACAUAAAACUAUUGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017758885.1	ncRNA:24   AGGUUAUCAAAAUACAGUGUAGUC   1   ||||||||||||||||||=||||| targets:1655   UCCAAUAGUUUUAUGUCAUAUCAG   1678 Target Full Sequence	1.5	PREDICTED: Gossypium arboreum enolase-like (LOC108459500), mRNA	enolase-like(LOC108459500)	coding protein	psRNATarget
XM_017758885.1	ncRNA:24   AGGUUAUCAAAAUACAGUGUAGUC   1   |=||||||||||||||||=||||* targets:1386   UUCAAUAGUUUUAUGUCAUAUCAA   1409 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum enolase-like (LOC108459500), mRNA	enolase-like(LOC108459500)	coding protein	psRNATarget
XM_017759563.1	ncRNA:24   AGGUUAUCAAAAUACAGUGUAGUC   1   ||||||||||||||||||*||||* targets:2387   UCCAAUAGUUUUAUGUCAAAUCAU   2410 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum L-type lectin-domain containing receptor kinase IX.1-like (LOC108460187), mRNA	L-type lectin-domain containing receptor kinase IX.1-like(LOC108460187)	coding protein	psRNATarget
XM_017791651.1	ncRNA:24   AGGUUAUCAAAAUACAGUGUAGUC   1   ||=||||*|||||||*|||||||| targets:3422   UCUAAUAAUUUUAUGCCACAUCAG   3445 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum probable LRR receptor-like serine/threonine-protein kinase At3g47570 (LOC108487338), mRNA	probable LRR receptor-like serine/threonine-protein kinase At3g47570(LOC108487338)	coding protein	psRNATarget