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BaseInfo

ncRNA ID novel_gar_miR1076
Species Gossypium arboreum
Class miRNA
Genome position Chr11:26851518-26851564 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588
Length 20
Mature sequence(if miRNA) 28 - AAGUGGCUGAAGGCCUUGCU - 47
Stem-loop(if miRNA) UC      -   U        UG
  UAAGGC UUC GUCACUUG  A
  |||||| ||| ||||||||
  GUUCCG AAG CGGUGAAU  A
UC      G   U        UC
Stem-loop sequence UCUAAGGCUUCUGUCACUUGUGAACUUAAGUGGCUGAAGGCCUUGCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017782736.1
ncRNA:20   UCGUUCCGGAAGUCGGUGAA   1
  ||||||**||||||||||||
targets:1972   AGCAAGAGCUUCAGCCACUU   1991

2.5 PREDICTED: Gossypium arboreum protein ASPARTIC PROTEASE IN GUARD CELL 1-like (LOC108479893), transcript variant X1, mRNA protein ASPARTIC PROTEASE IN GUARD CELL 1-like(LOC108479893) coding protein psRNATarget