ncRNA ID | novel_gar_miR1076 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr11:26851518-26851564 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588 |
Length | 20 |
Mature sequence(if miRNA) | 28 - AAGUGGCUGAAGGCCUUGCU - 47 |
Stem-loop(if miRNA) |
UC      -   U        UG   UAAGGC UUC GUCACUUG  A   |||||| ||| ||||||||   GUUCCG AAG CGGUGAAU  A UC      G   U        UC |
Stem-loop sequence | UCUAAGGCUUCUGUCACUUGUGAACUUAAGUGGCUGAAGGCCUUGCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017782736.1 |
|
2.5 | PREDICTED: Gossypium arboreum protein ASPARTIC PROTEASE IN GUARD CELL 1-like (LOC108479893), transcript variant X1, mRNA | protein ASPARTIC PROTEASE IN GUARD CELL 1-like(LOC108479893) | coding protein | psRNATarget |