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BaseInfo

ncRNA ID	ath-miRf11048-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	22
Mature sequence(if miRNA)	NA - GAUGAAGAAGCUGAAGUACAGG - NA
Stem-loop(if miRNA)	CU  AGU  AG   GAUUAU     GGUUGGUGGUGACCAGUGGACCACUGCUCAAAUAUCUGAUG GAUGAAGAAG  GA   AC  GCC      GGAAU                                         C ||||||||||  ||   ||  |||      |||||                                         U CUACUUCUUC  UU   UG  CGG      UGACG                                         G           -U  GAU  -G   -----U     UCCACGUCGUCUUUAACCGACAAGCUGAAGUGGUCUGGUAC
Stem-loop sequence	GAUGAAGAAGCUGAAGUACAGGCCGAUUAUGGAAUGGUUGGUGGUGACCAGUGGACCACUGCUCAAAUAUCUGAUGCUGCAUGGUCUGGUGAAGUCGAACAGCCAAUUUCUGCUGCACCUGCAGUUGGCGGUUAGUUUCUUCUUCAUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_148826.1	ncRNA:22   GGACAUGAAGUCGAAGAAGUAG   1   |||*|=|||||||||||||||| targets:59   CCUCUGCUUCAGCUUCUUCAUC   80 Target Full Sequence	2.0	Arabidopsis thaliana hypothetical protein partial mRNA	hypothetical protein(AT3G43682)	coding protein	psRNATarget
NM_102855.4	ncRNA:22   GGACAUGAAGUCGAAGAAGUAG   1   =||*|==||||||||||||||| targets:105   UCUCUGUUUCAGCUUCUUCAUC   126 Target Full Sequence	3.0	Arabidopsis thaliana sulfiredoxin (SRX), mRNA	sulfiredoxin(SRX)	coding protein	psRNATarget
NM_001332946.1	ncRNA:22   GGACAUGAAGUCGAAGAAGUAG   1   =||*|==||||||||||||||| targets:80   UCUCUGUUUCAGCUUCUUCAUC   101 Target Full Sequence	3.0	Arabidopsis thaliana sulfiredoxin (SRX), mRNA	sulfiredoxin(SRX)	coding protein	psRNATarget
NM_001198192.1	ncRNA:22   GGACAUGAAGUCGAAGAAGUAG   1   =||*|==||||||||||||||| targets:155   UCUCUGUUUCAGCUUCUUCAUC   176 Target Full Sequence	3.0	Arabidopsis thaliana sulfiredoxin (SRX), mRNA	sulfiredoxin(SRX)	coding protein	psRNATarget
NM_001084169.1	ncRNA:22   GGACAUGAAGUCGAAGAAGUAG   1   =||*|==||||||||||||||| targets:80   UCUCUGUUUCAGCUUCUUCAUC   101 Target Full Sequence	3.0	Arabidopsis thaliana sulfiredoxin (SRX), mRNA	sulfiredoxin(SRX)	coding protein	psRNATarget
AK117789.1	ncRNA:22   GGACAUGAAGUCGAAGAAGUAG   1   =||*|==||||||||||||||| targets:51   UCUCUGUUUCAGCUUCUUCAUC   72 Target Full Sequence	3.0	Arabidopsis thaliana At1g31170 mRNA for unknown protein, complete cds, clone: RAFL17-48-A22	NA	coding protein	psRNATarget
NM_001084168.1	ncRNA:22   GGACAUGAAGUCGAAGAAGUAG   1   =||*|==||||||||||||||| targets:80   UCUCUGUUUCAGCUUCUUCAUC   101 Target Full Sequence	3.0	Arabidopsis thaliana sulfiredoxin (SRX), mRNA	sulfiredoxin(SRX)	coding protein	psRNATarget
AY086792.1	ncRNA:22   GGACAUGAAGUCGAAGAAGUAG   1   =||*|==||||||||||||||| targets:76   UCUCUGUUUCAGCUUCUUCAUC   97 Target Full Sequence	3.0	Arabidopsis thaliana clone 2771 mRNA, complete sequence	NA	coding protein	psRNATarget
BX817590.1	ncRNA:22   GGACAUGAAGUCGAAGAAGUAG   1   =||*|==||||||||||||||| targets:44   UCUCUGUUUCAGCUUCUUCAUC   65 Target Full Sequence	3.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL31ZF09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
BT004731.1	ncRNA:22   GGACAUGAAGUCGAAGAAGUAG   1   =||*|==||||||||||||||| targets:44   UCUCUGUUUCAGCUUCUUCAUC   65 Target Full Sequence	3.0	Arabidopsis thaliana At1g31170 gene, complete cds	NA	coding protein	psRNATarget