| ncRNA ID | novel_gar_miR1072 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr1:12021310-12021522 [+] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR1029588 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - GUUAAUGCUUGUUAACUUUGUUGA - 24 |
| Stem-loop(if miRNA) |
--- C C -A U AAU GAAUACUGUGUUAGCAAUUAUUUAAUUUUCAAAAUUUAAAAAUUUUAAAAAUAU GUUAAUG UUGUUAACUUUGUUGA AUG AAUCCAUGUGAAU GU GU A ||||||| |||||||||||||||| ||| ||||||||||||| || || UAAUUAC AACAAUUGAAACGAUU UAU UUAGGUGCACUUA CA CA A UUU A A CA - GUG AUCGUUAAUUAAUUAAAAAUAUAAAAAAUUAUUGAAAAUUUAAAAUUUUUUUAA |
| Stem-loop sequence | GUUAAUGCUUGUUAACUUUGUUGACAUGAAAUCCAUGUGAAUUGUAAUGUGAAUACUGUGUUAGCAAUUAUUUAAUUUUCAAAAUUUAAAAAUUUUAAAAAUAUAAAAUUUUUUUAAAAUUUAAAAGUUAUUAAAAAAUAUAAAAAUUAAUUAAUUGCUAACGUGACAUUCACGUGGAUUACUAUAUUAGCAAAGUUAACAAACAUUAAUUUU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017761912.1 |
|
1.5 | PREDICTED: Gossypium arboreum DEAD-box ATP-dependent RNA helicase 10-like (LOC108461930), transcript variant X1, mRNA | DEAD-box ATP-dependent RNA helicase 10-like(LOC108461930) | coding protein | psRNATarget | |||||||||
| XM_017761914.1 |
|
1.5 | PREDICTED: Gossypium arboreum DEAD-box ATP-dependent RNA helicase 10-like (LOC108461930), transcript variant X2, mRNA | DEAD-box ATP-dependent RNA helicase 10-like(LOC108461930) | coding protein | psRNATarget |