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BaseInfo

ncRNA ID novel_gar_miR1071
Species Gossypium arboreum
Class miRNA
Genome position Chr3:44188989-44189181 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029586;SRR1029587
Length 24
Mature sequence(if miRNA) 170 - ACUAAAGACCAGGACUUUUAGCGG - 193
Stem-loop(if miRNA) --               U     C       --G  U               -A  A GA    UAGCAACGCUUG       U           ACC
  ACUAAAGACCAGGAC UUUAG GGCGCUU   UA AAAAUGCCGCUAAAG  CC G  CUUU            UAUAAAA CGCCGCUAAAG   A
  ||||||||||||||| ||||| |||||||   || |||||||||||||||  || |  ||||            ||||||| |||||||||||
  UGAUUUCUGGUCCUG AAAUC CCGCGAA   AU UUUUGCGGCGAUUUU  GG C  GAAA            AUAUUUU GCGGCGAUUUU   G
GG               U     A       AAA  U               CA  A AA    UUACCGCAAAAA       C           CAG
Stem-loop sequence ACUAAAGACCAGGACUUUUAGCGGCGCUUGUAUAAAAUGCCGCUAAAGACCAGGACUUUUAGCAACGCUUGUAUAAAAUCGCCGCUAAAGACCAGGACUUUUAGCGGCGCUUUUAUAAAAAACGCCAUUAAAGAACAGGACUUUUAGCGGCGUUUUUUAAAAAAGCGCCACUAAAUGUCCUGGUCUUUAGUGG