ncRNA ID | novel_gar_miR1071 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr3:44188989-44189181 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029586;SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 170 - ACUAAAGACCAGGACUUUUAGCGG - 193 |
Stem-loop(if miRNA) |
--               U     C       --G  U               -A  A GA    UAGCAACGCUUG       U           ACC   ACUAAAGACCAGGAC UUUAG GGCGCUU   UA AAAAUGCCGCUAAAG  CC G  CUUU            UAUAAAA CGCCGCUAAAG   A   ||||||||||||||| ||||| |||||||   || |||||||||||||||  || |  ||||            ||||||| |||||||||||   UGAUUUCUGGUCCUG AAAUC CCGCGAA   AU UUUUGCGGCGAUUUU  GG C  GAAA            AUAUUUU GCGGCGAUUUU   G GG               U     A       AAA  U               CA  A AA    UUACCGCAAAAA       C           CAG |
Stem-loop sequence | ACUAAAGACCAGGACUUUUAGCGGCGCUUGUAUAAAAUGCCGCUAAAGACCAGGACUUUUAGCAACGCUUGUAUAAAAUCGCCGCUAAAGACCAGGACUUUUAGCGGCGCUUUUAUAAAAAACGCCAUUAAAGAACAGGACUUUUAGCGGCGUUUUUUAAAAAAGCGCCACUAAAUGUCCUGGUCUUUAGUGG |