| ncRNA ID | novel_gar_miR1068 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr11:23079102-23079204 [+] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR1029588;SRR3180719 |
| Length | 22 |
| Mature sequence(if miRNA) | 1 - AAGUGGGGUGCGAGGAAAGAUC - 22 |
| Stem-loop(if miRNA) |
-A U - AUUUCUCU -UUUAUA ACA AGUGGGG GCG AGGAAAGAUC UCUCUUU UGU C ||||||| ||| |||||||||| ||||||| ||| UUACCCC CGU UCCUUUCUAG AGAGAAA ACA A CC C A ACCAAACU CACACAC CAC |
| Stem-loop sequence | AAGUGGGGUGCGAGGAAAGAUCAUUUCUCUUCUCUUUUUUAUAUGUACACACACACACACACACAAAGAGAUCAAACCAGAUCUUUCCUAUGCCCCCCAUUCC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017768336.1 |
|
2.5 | PREDICTED: Gossypium arboreum putative pentatricopeptide repeat-containing protein At1g09680 (LOC108467625), transcript variant X3, mRNA | putative pentatricopeptide repeat-containing protein At1g09680(LOC108467625) | coding protein | psRNATarget | |||||||||
| XM_017768335.1 |
|
2.5 | PREDICTED: Gossypium arboreum putative pentatricopeptide repeat-containing protein At1g09680 (LOC108467625), transcript variant X1, mRNA | putative pentatricopeptide repeat-containing protein At1g09680(LOC108467625) | coding protein | psRNATarget |