| ncRNA ID | novel_gar_miR1049 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr9:61891768-61891908 [+] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR1029588 |
| Length | 24 |
| Mature sequence(if miRNA) | 118 - AGCAGAAUUAUGAAUGAUGUGAUA - 141 |
| Stem-loop(if miRNA) |
-- CA AA --C C U ---------- CAU A UCAUAUUAUUCAUGGUUU UUUAAU UAAAAGGA GUAUCAUU UUU UUU UUUA UGU U |||||||||||||||||| |||||| |||||||| |||||||| ||| ||| |||| ||| AGUGUAGUAAGUAUUAAG GAGUUA AUUUUCUU UAUAGUAA AAA AAA AAAU ACA A AU AC -- CUA A U CUUUCAAAUU -UU U |
| Stem-loop sequence | UCAUAUUAUUCAUGGUUUCAUUUAAUAAUAAAAGGACGUAUCAUUCUUUUUUUUUUACAUUGUAUAUACAUUUAAAUUAAACUUUCAAAUAAAAAAUGAUAUAUCUUCUUUUAAUUGAGCAGAAUUAUGAAUGAUGUGAUA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017794707.1 |
|
3.0 | PREDICTED: Gossypium arboreum pleckstrin homology domain-containing protein 1-like (LOC108489945), mRNA | pleckstrin homology domain-containing protein 1-like(LOC108489945) | coding protein | psRNATarget |