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BaseInfo

ncRNA ID novel_gar_miR1047
Species Gossypium arboreum
Class miRNA
Genome position Chr9:53433351-53433472 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588
Length 24
Mature sequence(if miRNA) 1 - AGAGCCAUAUAGAAUGACGUCACC - 24
Stem-loop(if miRNA) --A        U        G       U   CU    GAUU         UGUAUU      UU
   GAGCCAUA AGAAUGAC UCACCAG GUA  AUAU    UUUUUAAAA      AUUUUU  A
   |||||||| |||||||| ||||||| |||  ||||    |||||||||      ||||||  A
   CUCGGUAU UCUUACUG AGUGGUU UAU  UAUA    AAAAAUUUU      UAAAAA  U
CAC        U        A       U   UU    ----         -----U      UU
Stem-loop sequence AGAGCCAUAUAGAAUGACGUCACCAGUGUACUAUAUGAUUUUUUUAAAAUGUAUUAUUUUUUUAAUUUAAAAAUUUUUUAAAAAAUAUUUUAUUUUGGUGAAGUCAUUCUUUAUGGCUCCAC