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BaseInfo

ncRNA ID novel_gar_miR1046
Species Gossypium arboreum
Class miRNA
Genome position Chr9:48612675-48612901 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588
Length 23
Mature sequence(if miRNA) 205 - UGGAGGAGAGCAAAAUUCGGCGC - 227
Stem-loop(if miRNA) --                                                                C        A                          -----AUA     A
  GCCGAAUUUUGCUCUCCUCCAUAGCUGGGGUUUCUUCAAUUUUCAAACUCCAUAGUAAGUGAUU CAAGCUCC UUUUUAAUGAUCUUUACAUUUUUGGA        AGCUU A
  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||        |||||
  CGGCUUAAAACGAGAGGAGGUAUCGACCCCAAAGAAGUUAAAAGUUUGAGGUAUCAUUCACUAA GUUCGGGG AAAAAUUACUAGAAAUGUAAAAACCU        UUGAA U
CG                                                                A        C                          CAGGGCCA     C
Stem-loop sequence GCCGAAUUUUGCUCUCCUCCAUAGCUGGGGUUUCUUCAAUUUUCAAACUCCAUAGUAAGUGAUUCCAAGCUCCAUUUUUAAUGAUCUUUACAUUUUUGGAAUAAGCUUAAUCAAGUUACCGGGACUCCAAAAAUGUAAAGAUCAUUAAAAACGGGGCUUGAAAUCACUUACUAUGGAGUUUGAAAAUUGAAGAAACCCCAGCUAUGGAGGAGAGCAAAAUUCGGCGC