ncRNA ID | novel_gar_miR1043 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr9:4776858-4777018 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588 |
Length | 24 |
Mature sequence(if miRNA) | 138 - AAGGCCAUGACUUUUAGCGGCGUU - 161 |
Stem-loop(if miRNA) |
--            C   AA       G GU      AGAAA                   UA      G   UG    U   CGCUGCUAAAGG CAU  UUUUUAG G  GUUUUU     AAGCGUCGCUAAAGGUUAU  UUUUUA UGG  UUUU A   |||||||||||| |||  ||||||| |  ||||||     |||||||||||||||||||  |||||| |||  |||| G   GCGGCGAUUUUC GUA  GGAAAUC C  CGAAAG     UUUGCGGCGAUUUUCAAUA  GGAAAU AUU  GAAA G UU            A   CC       G UG      GGGUG                   CC      G   GU    A |
Stem-loop sequence | CGCUGCUAAAGGCCAUAAUUUUUAGGGGUGUUUUUAGAAAAAGCGUCGCUAAAGGUUAUUAUUUUUAGUGGUGUUUUUAGGAAAAGUGUUAGUAAAGGCCAUAACUUUUAGCGGCGUUUGUGGGGAAAGCGUCGCUAAAGGCCAUGACUUUUAGCGGCGUU |