ncRNA ID | novel_gar_miR1042 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr10:112233324-112233386 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588 |
Length | 21 |
Mature sequence(if miRNA) | 1 - AGCCUGUAUGGCUCACACGGC - 21 |
Stem-loop(if miRNA) |
--    U      CUC       CACACUCCA   AGCC GUAUGG   ACACGGC         G   |||| ||||||   |||||||   UCGG CAUGUC   UGUGCCG         C UA    -      UUC       AUACACCAC |
Stem-loop sequence | AGCCUGUAUGGCUCACACGGCCACACUCCAGCCACCACAUAGCCGUGUCUUCUGUACGGCUAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017762252.1 |
|
1.5 | PREDICTED: Gossypium arboreum G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13 (LOC108462280), mRNA | G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13(LOC108462280) | coding protein | psRNATarget |