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BaseInfo

ncRNA ID novel_gar_miR1041
Species Gossypium arboreum
Class miRNA
Genome position Chr9:39961283-39961450 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588
Length 24
Mature sequence(if miRNA) 1 - AACCUACUGUAGGUCGGUAAGCAC - 24
Stem-loop(if miRNA) --      C     GU     ---AG          ACCCUUAAAUGCGUGAACUGUAUGUAUGAUGUAUGUGCUGAGCAUGAUG
  AACCUA UGUAG  CGGUA     CACUAUUUAG                                                 G
  |||||| |||||  |||||     ||||||||||                                                 U
  UUGGGU ACGUU  GUCGU     AUAUACUGUA                                                 U
GG      U     AC     AUGUC          CGAUUAUGUACUUAUAGACAAUAUGUAUGUCAAGUCAUCAGUAAGUAUU
Stem-loop sequence AACCUACUGUAGGUCGGUAAGCACUAUUUAGACCCUUAAAUGCGUGAACUGUAUGUAUGAUGUAUGUGCUGAGCAUGAUGGUUUUAUGAAUGACUACUGAACUGUAUGUAUAACAGAUAUUCAUGUAUUAGCAUGUCAUAUACUGUAUGCUGCAUUGCAUUGGGUUGG