ncRNA ID | novel_gar_miR1037 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr9:6654766-6654853 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588 |
Length | 22 |
Mature sequence(if miRNA) | 67 - UUGGGGGAAGGAACAGACAGCU - 88 |
Stem-loop(if miRNA) |
--UU A GCUUUUU -A CUAUACGC GGGGGAAGGA CAGACA GACU GU A |||||||||| |||||| |||| || U CCUUCUUCCU GUUUGU UUGG AU A UCUU G ACUUUAU CA UUUCUUUA |
Stem-loop sequence | UUGGGGGAAGGAACAGACAGCUUUUUGACUAGUCUAUACGCAUAAUUUCUUUUAACGGUUUAUUUCAUGUUUGGUCCUUCUUCCUUCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017760465.1 |
|
2.5 | PREDICTED: Gossypium arboreum serine/arginine-rich splicing factor SC35 (LOC108460805), transcript variant X7, mRNA | serine/arginine-rich splicing factor SC35(LOC108460805) | coding protein | psRNATarget | |||||||||
XM_017760464.1 |
|
2.5 | PREDICTED: Gossypium arboreum serine/arginine-rich splicing factor SC35 (LOC108460805), transcript variant X1, mRNA | serine/arginine-rich splicing factor SC35(LOC108460805) | coding protein | psRNATarget |