ncRNA ID | novel_gar_miR1034 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr9:28867591-28867678 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUGUGUCUCUGAACUCAAGAGCAA - 24 |
Stem-loop(if miRNA) |
--    G    ---        U    ----   A  GUAAGUUUCGU   GCUU UUGA   CAGAGAUA CAUC    CGC AC           U   |||| ||||   |||||||| ||||    ||| ||           U   CGAG AACU   GUCUCUGU GUAG    GCG AA           A AA    -    CAA        -    UUUC   C  UUACUUUCAUG |
Stem-loop sequence | GCUUGUUGACAGAGAUAUCAUCCGCAACGUAAGUUUCGUUUAGUACUUUCAUUAACGCGCUUUGAUGUGUCUCUGAACUCAAGAGCAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017748988.1 |
|
1.5 | PREDICTED: Gossypium arboreum uncharacterized LOC108451283 (LOC108451283), mRNA | uncharacterized LOC108451283(LOC108451283) | coding protein | psRNATarget | |||||||||
XM_017749298.1 |
|
1.5 | PREDICTED: Gossypium arboreum uncharacterized LOC108451631 (LOC108451631), mRNA | uncharacterized LOC108451631(LOC108451631) | coding protein | psRNATarget |