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BaseInfo

ncRNA ID	novel_gar_miR1020
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr9:76689829-76689885 [-]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR1029588
Length	20
Mature sequence(if miRNA)	1 - AAGGAGAGGAGAAAGCUCAA - 20
Stem-loop(if miRNA)	--A      G   A    UG  C   AUA    AGUUUU UCC UCUU  UU AUC   G    |||||| ||| ||||  || |||   C    UCGAAA AGG AGAG  AA UAG   C AAC      G   -    GA  -   AAU
Stem-loop sequence	AAGUUUUGUCCAUCUUUGUUCAUCAUAGCCUAAGAUAAAGGAGAGGAGAAAGCUCAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017772509.1	ncRNA:20   AACUCGAAAGAGGAGAGGAA   1   *||=*||||||||||||||| targets:59   AUGGCCUUUCUCCUCUCCUU   78 Target Full Sequence	2.0	PREDICTED: Gossypium arboreum uncharacterized LOC108470967 (LOC108470967), transcript variant X2, mRNA	uncharacterized LOC108470967(LOC108470967)	coding protein	psRNATarget
XM_017772508.1	ncRNA:20   AACUCGAAAGAGGAGAGGAA   1   *||=*||||||||||||||| targets:59   AUGGCCUUUCUCCUCUCCUU   78 Target Full Sequence	2.0	PREDICTED: Gossypium arboreum uncharacterized LOC108470967 (LOC108470967), transcript variant X1, mRNA	uncharacterized LOC108470967(LOC108470967)	coding protein	psRNATarget
XM_017785039.1	ncRNA:20   AACUCGAAAGAGGAGAGGAA   1   ||||*|||||||||=||||| targets:296   UUGAUCUUUCUCCUUUCCUU   315 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum WAT1-related protein At5g40240-like (LOC108481941), mRNA	WAT1-related protein At5g40240-like(LOC108481941)	coding protein	psRNATarget