ncRNA ID | novel_gar_miR1016 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr9:1005260-1005310 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588 |
Length | 24 |
Mature sequence(if miRNA) | 28 - ACACGACUUUAGGACAUGGGCGUG - 51 |
Stem-loop(if miRNA) |
--  A      G   -C  C     A   CG CCAUGU UCU  AG CGUGU U   || |||||| |||  || ||||| G   GC GGUACA GGA  UC GCACA A GU  G      -   UU  A     A |
Stem-loop sequence | CGACCAUGUGUCUCAGCCGUGUAUGAAACACGACUUUAGGACAUGGGCGUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017768942.1 |
|
2.5 | PREDICTED: Gossypium arboreum uncharacterized protein C24B11.05-like (LOC108468081), mRNA | uncharacterized protein C24B11.05-like(LOC108468081) | coding protein | psRNATarget |