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BaseInfo

ncRNA ID novel_gar_miR1016
Species Gossypium arboreum
Class miRNA
Genome position Chr9:1005260-1005310 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588
Length 24
Mature sequence(if miRNA) 28 - ACACGACUUUAGGACAUGGGCGUG - 51
Stem-loop(if miRNA) --  A      G   -C  C     A
  CG CCAUGU UCU  AG CGUGU U
  || |||||| |||  || ||||| G
  GC GGUACA GGA  UC GCACA A
GU  G      -   UU  A     A
Stem-loop sequence CGACCAUGUGUCUCAGCCGUGUAUGAAACACGACUUUAGGACAUGGGCGUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017768942.1
ncRNA:24   GUGCGGGUACAGGAUUUCAGCACA   1
  *||*=|||*||||||||||=||||
targets:653   AACUUCCAAGUCCUAAAGUUGUGU   676

2.5 PREDICTED: Gossypium arboreum uncharacterized protein C24B11.05-like (LOC108468081), mRNA uncharacterized protein C24B11.05-like(LOC108468081) coding protein psRNATarget