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BaseInfo

ncRNA ID	ath-miRf11042-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - GGAAGAGGCAGUGCAUGGGUA - NA
Stem-loop(if miRNA)	C       G      U        A   ---  -      GAGU AGGGAG CAGGGAA AGGCAG GCAUGGGU GAG   AC AAAACA    C |||||| ||||||| |||||| |||||||| |||   || ||||||    G UCUCUC GUCCCUU UUCGUC CGUACCUA CUC   UG UUUUGU    U       U       G      U        A   AAA  A      AAUU
Stem-loop sequence	AGGGAGCCAGGGAAGAGGCAGUGCAUGGGUAGAGACAAAACAGAGUCGUUUAAUGUUUUAGUAAACUCAAUCCAUGCUCUGCUUGUUCCCUGUCUCUCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JA894745.1	ncRNA:21   AUGGGUACGUGACGGAGAAGG   1   ||||||||||||||||||||| targets:115   UACCCAUGCACUGCCUCUUCC   135 Target Full Sequence	0.0	Sequence 62 from Patent WO2011067745	NA	coding protein	psRNATarget
BX817426.1	ncRNA:21   AUGGGUACGUGACGGAGAAGG   1   ||||||||||||||||||||| targets:119   UACCCAUGCACUGCCUCUUCC   139 Target Full Sequence	0.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL21ZF12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
AF419552.1	ncRNA:21   AUGGGUACGUGACGGAGAAGG   1   ||||||||||||||||||||| targets:149   UACCCAUGCACUGCCUCUUCC   169 Target Full Sequence	0.0	Arabidopsis thaliana At2g47020/F14M4.15 mRNA sequence	NA	coding protein	psRNATarget
BT000408.1	ncRNA:21   AUGGGUACGUGACGGAGAAGG   1   |||||*||||||||||||*|| targets:1557   UACCCCUGCACUGCCUCUACC   1577 Target Full Sequence	2.5	Arabidopsis thaliana putative TGACG-sequence-specific bZIP DNA-binding protein (At2g40950) mRNA, complete cds	NA	coding protein	psRNATarget
AY136295.1	ncRNA:21   AUGGGUACGUGACGGAGAAGG   1   |||||*||||||||||||*|| targets:1655   UACCCCUGCACUGCCUCUACC   1675 Target Full Sequence	2.5	Arabidopsis thaliana putative TGACG-sequence-specific bZIP DNA-binding protein (At2g40950) mRNA, complete cds	NA	coding protein	psRNATarget
NM_129659.3	ncRNA:21   AUGGGUACGUGACGGAGAAGG   1   |||||*||||||||||||*|| targets:1787   UACCCCUGCACUGCCUCUACC   1807 Target Full Sequence	2.5	Arabidopsis thaliana Basic-leucine zipper (bZIP) transcription factor family protein (BZIP17), mRNA	Basic-leucine zipper (bZIP) transcription factor family protein(BZIP17)	coding protein	psRNATarget