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BaseInfo

ncRNA ID novel_gar_miR1007
Species Gossypium arboreum
Class miRNA
Genome position Chr11:76007082-76007273 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588
Length 24
Mature sequence(if miRNA) 1 - AUGGCAUGCUGAGAGGUUGACACG - 24
Stem-loop(if miRNA) -UA  -         A          A     C        A       A    AUCUUUAA    AAAUAAAUUUAUAAAAAGUAUAAAUUUUUGU
   GU AGCUUUUCA UAUGCCAUGU ACGAG AUAAAUUA AAAAAUA AAAU        AAAU                               C
   || ||||||||| |||||||||| ||||| |||||||| ||||||| ||||        ||||
   CA UUGGAGAGU GUACGGUACA UGUUU UAUUUAAU UUUUUAU UUUA        UUUU                               U
GCA  G         C          C     A        G       A    --AUUAUU    UCAUAUUAAAAGGGUGUAACUCUUACUUGAA
Stem-loop sequence UAGUAGCUUUUCAAUAUGCCAUGUAACGAGCAUAAAUUAAAAAAAUAAAAAUAUCUUUAAAAAUAAAUAAAUUUAUAAAAAGUAUAAAUUUUUGUCUAAGUUCAUUCUCAAUGUGGGAAAAUUAUACUUUUUUUAUUAAUUUAUAUUUUUGUAAUUUAUAUUUGUCACAUGGCAUGCUGAGAGGUUGACACG