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BaseInfo

ncRNA ID ath-miRf11041-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - ACGACGGUAGUCACGUGAGAC - NA
Stem-loop(if miRNA)     AA    C   A           C U  GA A
GGCU  ACGA GGU GUCACGUGAGA G CU  C C
||||  |||| ||| ||||||||||| | ||  |
UCGA  UGUU CCG UAGUGCACUCU C GG  G G
    AG    A   A           - U  UG U
Stem-loop sequence GGCUAAACGACGGUAGUCACGUGAGACGUCUGACACGUGGUGGUCUCUCACGUGAUAGCCAUUGUGAAGCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_130183.4
ncRNA:21   CAGAGUGCACUGAUGGCAGCA   1
  |||||||||||||||||||||
targets:466   GUCUCACGUGACUACCGUCGU   486

0.0 Arabidopsis thaliana Fatty acid/sphingolipid desaturase (SLD2), mRNA Fatty acid/sphingolipid desaturase(SLD2) coding protein psRNATarget
BX820915.1
ncRNA:21   CAGAGUGCACUGAUGGCAGCA   1
  |||||||||||||||||||||
targets:465   GUCUCACGUGACUACCGUCGU   485

0.0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH81ZC08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
AK228217.1
ncRNA:21   CAGAGUGCACUGAUGGCAGCA   1
  |||||||||||||||||||||
targets:385   GUCUCACGUGACUACCGUCGU   405

0.0 Arabidopsis thaliana mRNA for putative fatty acid desaturase/cytochrome b5 fusion protein, clone: RAFL14-66-N13 NA coding protein psRNATarget