ncRNA ID | novel_gar_miR1001 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr8:40282231-40282336 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588 |
Length | 23 |
Mature sequence(if miRNA) | 84 - ACGGAGUUGGUGUGUAGAGGCUA - 106 |
Stem-loop(if miRNA) |
-UCUGA     UG UG      --GU  --A     G    CA        UGG       UUAUG  C  ACUCCG    AU   GCAUG UGUG  GGGAUGGG   G       |||||  |  ||||||    ||   ||||| ||||  ||||||||   U       GAUGU  G  UGAGGC    UG   UGUGU AUAC  CCCUAUUU   U AUCGGA     GU GU      AGGU  GGA     G    AC        UAG |
Stem-loop sequence | UCUGAUUAUGUGCUGACUCCGGUAUAGCAUGGUGUGCAGGGAUGGGUGGGUUGAUUUUAUCCCCACAUAGUGUGUAGGGUUGGACGGAGUUGGUGUGUAGAGGCUA |