ncRNA ID | novel_gar_miR998 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr8:28419653-28419773 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588;SRR3180719;SRR3180721;SRR1029586 |
Length | 21 |
Mature sequence(if miRNA) | 1 - GUUCAAUAAAGCUGUGGGAAG - 21 |
Stem-loop(if miRNA) |
--            C            UU   - U     UUUUC  UG UAUUUU   UU    A   UUCCACAGCUUU UUGAACUGCAAC  CGU C UACAU     CU  U      GUG  GCUU U   |||||||||||| ||||||||||||  ||| | |||||     ||  |      |||  ||||   AGGGUGUCGAAA AACUUGGCGUUG  GUA G AUGUA     GA  G      UAU  CGGA A GA            U            CU   U U     ----U  GU ------   GG    U |
Stem-loop sequence | UUCCACAGCUUUCUUGAACUGCAACUUCGUCUUACAUUUUUCCUUGUUAUUUUGUGUUGCUUAUAUAGGCGGUAUGUGAGUAUGUAUGUAUGUCGUUGCGGUUCAAUAAAGCUGUGGGAAG |