ncRNA ID | novel_gar_miR977 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr8:115443742-115443900 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588;SRR1029586 |
Length | 24 |
Mature sequence(if miRNA) | 136 - AAUCGGGGUUCUGAACAGCGAGUA - 159 |
Stem-loop(if miRNA) |
-AAU  G           -G G  UAAU A        C  UG AG      --------A         U    AGAUUUG  UA     CG GGUUCUGAACA  C AG    C CUGUUAUU GU  A  GUAAGU         GAUCUCUUG UUCG       UC  U     || |||||||||||  | ||    | |||||||| ||  |  ||||||         ||||||||| ||||       ||     GC UUAGGGCUUGU  G UC    G GAUAAUAA CA  U  CAUUCG         UUAGAGAAC AAGC       AG  U GAUU  G           GA G  --UU -        -  GU AA      GUUUAAAAG         U    -GUAUCA  UC |
Stem-loop sequence | AAUCGGGGUUCUGAACAGCGAGUAAUCACUGUUAUUCGUUGAAGGUAAGUAGAUCUCUUGUUUCGAGAUUUGUCUAUUCUGAACUAUGCGAAUCAAGAGAUUGAAAAUUUGGCUUACAAUUGACAAUAAUAGGUUCUGGAGUGUUCGGGAUUGCGUUAG |