ncRNA ID | novel_gar_miR966 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr8:89471293-89471435 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACAGGGAGUGUAGGGUUGGACGGA - 24 |
Stem-loop(if miRNA) |
--    -        GGG UG -       UG -A     GGGGCUG  U    --A  A  UG A   U    G   U   ACAG GGAGUGUA   U  G ACGGAGA  G  GUGUA       GU GGGU   GG CU  U UGC GUAU AUU U   |||| ||||||||   |  | |||||||  |  |||||       || ||||   || ||  | ||| |||| |||   UGUC UUUCGCGU   A  C UGUCUCU  U  UACAU       CA CCCA   CC GG  A AUG CAUA UGA U AC    A        -AA GU A       GU AG     ------A  -    GAA  -  GU -   U    G   U |
Stem-loop sequence | ACAGGGAGUGUAGGGUUGGACGGAGAUGGAGUGUAGGGGCUGGUUGGGUAGGACUUGUAUGCUGUAUGAUUUUUUAGUGAUACUGUAAUGGGCCAAGACCCACAUACAUGAUUGUCUCUGUACUGAAAUGCGCUUUACUGUCA |