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BaseInfo

ncRNA ID novel_gar_miR966
Species Gossypium arboreum
Class miRNA
Genome position Chr8:89471293-89471435 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588
Length 24
Mature sequence(if miRNA) 1 - ACAGGGAGUGUAGGGUUGGACGGA - 24
Stem-loop(if miRNA) --    -        GGG UG -       UG -A     GGGGCUG  U    --A  A  UG A   U    G   U
  ACAG GGAGUGUA   U  G ACGGAGA  G  GUGUA       GU GGGU   GG CU  U UGC GUAU AUU U
  |||| ||||||||   |  | |||||||  |  |||||       || ||||   || ||  | ||| |||| |||
  UGUC UUUCGCGU   A  C UGUCUCU  U  UACAU       CA CCCA   CC GG  A AUG CAUA UGA U
AC    A        -AA GU A       GU AG     ------A  -    GAA  -  GU -   U    G   U
Stem-loop sequence ACAGGGAGUGUAGGGUUGGACGGAGAUGGAGUGUAGGGGCUGGUUGGGUAGGACUUGUAUGCUGUAUGAUUUUUUAGUGAUACUGUAAUGGGCCAAGACCCACAUACAUGAUUGUCUCUGUACUGAAAUGCGCUUUACUGUCA