| ncRNA ID | novel_gar_miR964 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr7:81815153-81815304 [+] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR1029588;SRR1029586 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - AGAAAGGGCAAAAUGCAAUCUGAU - 24 |
| Stem-loop(if miRNA) |
-- A C G A C U -UUUG GA AUA AGAA GGG AAAAUGCAAUCU AUUUCUAAUACAGAA CUU CAUGGUAUU UUACCA GAU UGAU U |||| ||| |||||||||||| ||||||||||||||| ||| ||||||||| |||||| ||| |||| UCUU CCC UUUUACGUUAGG UGAGGAUUAUGUUUU GAA GUACCAUAA GAUGGU UUA ACUG U GA A A G C A C UGGUA -A AUC |
| Stem-loop sequence | AGAAAGGGCAAAAUGCAAUCUGAUUUCUAAUACAGAAACUUCCAUGGUAUUUUUACCAUUUGGAUGAUGAUAUAUUCUAGUCAAAUUAUGGUUGGUAGCAAUACCAUGAAAGCUUUUGUAUUAGGAGUGGGAUUGCAUUUUACCCAUUCUAG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017752094.1 |
|
1.0 | PREDICTED: Gossypium arboreum universal stress protein PHOS32-like (LOC108453792), transcript variant X3, mRNA | universal stress protein PHOS32-like(LOC108453792) | coding protein | psRNATarget | |||||||||
| XM_017759173.1 |
|
2.5 | PREDICTED: Gossypium arboreum uncharacterized LOC108459768 (LOC108459768), mRNA | uncharacterized LOC108459768(LOC108459768) | coding protein | psRNATarget |