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BaseInfo

ncRNA ID novel_gar_miR958
Species Gossypium arboreum
Class miRNA
Genome position Chr7:61111621-61111817 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588
Length 24
Mature sequence(if miRNA) 174 - UCUUCAGCUGUUGGCGUUUGAGUG - 197
Stem-loop(if miRNA) --                      C                                                                  C    AC
  CUCAAACGCCAACAGCUGAAGA UUGCUUUACUUUAUGUCUAAUUAUAGUUUGUUUGAUAUGUGAGUCAUGUGUAUAUGAUCUUAUCUU AGAU  U
  |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  A
  GAGUUUGCGGUUGUCGACUUCU AACGAAAUGAAAUACAGAUUAAUAUCAAACAAACUAUACACUCAGUACACAUAUACUAGAAUAGAA UCUG  A
GU                      A                                                                  U    AU
Stem-loop sequence CUCAAACGCCAACAGCUGAAGACUUGCUUUACUUUAUGUCUAAUUAUAGUUUGUUUGAUAUGUGAGUCAUGUGUAUAUGAUCUUAUCUUCAGAUACUAAUAGUCUUAAGAUAAGAUCAUAUACACAUGACUCACAUAUCAAACAAACUAUAAUUAGACAUAAAGUAAAGCAAAUCUUCAGCUGUUGGCGUUUGAGUG