ncRNA ID | novel_gar_miR958 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr7:61111621-61111817 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588 |
Length | 24 |
Mature sequence(if miRNA) | 174 - UCUUCAGCUGUUGGCGUUUGAGUG - 197 |
Stem-loop(if miRNA) |
--                      C                                                                  C    AC   CUCAAACGCCAACAGCUGAAGA UUGCUUUACUUUAUGUCUAAUUAUAGUUUGUUUGAUAUGUGAGUCAUGUGUAUAUGAUCUUAUCUU AGAU  U   |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  A   GAGUUUGCGGUUGUCGACUUCU AACGAAAUGAAAUACAGAUUAAUAUCAAACAAACUAUACACUCAGUACACAUAUACUAGAAUAGAA UCUG  A GU                      A                                                                  U    AU |
Stem-loop sequence | CUCAAACGCCAACAGCUGAAGACUUGCUUUACUUUAUGUCUAAUUAUAGUUUGUUUGAUAUGUGAGUCAUGUGUAUAUGAUCUUAUCUUCAGAUACUAAUAGUCUUAAGAUAAGAUCAUAUACACAUGACUCACAUAUCAAACAAACUAUAAUUAGACAUAAAGUAAAGCAAAUCUUCAGCUGUUGGCGUUUGAGUG |