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BaseInfo

ncRNA ID novel_gar_miR955
Species Gossypium arboreum
Class miRNA
Genome position Chr11:98646613-98646805 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588
Length 24
Mature sequence(if miRNA) 170 - ACGGAUUGUUGAUGUGGUACAUUA - 193
Stem-loop(if miRNA) ---AC    U         GU C        A  A    A      CG AA         A                AUUUA    ---U  ----CU   U
     GGAU GUUGAUGUG  A AUUAGCAC UU AGUG CUAAUA  U  UAUUUUUUU UUGACUUUUGACUAAA     GGGA    CU      CUA A
     |||| |||||||||  | |||||||| || |||| ||||||  |  ||||||||| ||||||||||||||||     ||||    ||      |||
     CCUA CAACUACAC  U UAAUCGUG AA UUAC GAUUGU  A  AUGAAAAAA AACUGAAAACUGAUUU     CCCU    GA      GAU A
AUUCC    -         UG A        C  C    A      AA CC         C                --CAA    UUUU  AAAUUU   U
Stem-loop sequence ACGGAUUGUUGAUGUGGUACAUUAGCACAUUAAGUGACUAAUACGUAAUAUUUUUUUAUUGACUUUUGACUAAAAUUUAGGGAUCUCUCUAUAAUUAGUUUAAAAGUUUUUCCCAACUUUAGUCAAAAGUCAACAAAAAAGUACCAAAUGUUAGACAUUCAACGUGCUAAUAUGUCACAUCAACAUCCCCUUA