ncRNA ID | novel_gar_miR955 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr11:98646613-98646805 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588 |
Length | 24 |
Mature sequence(if miRNA) | 170 - ACGGAUUGUUGAUGUGGUACAUUA - 193 |
Stem-loop(if miRNA) |
---AC    U         GU C        A  A    A      CG AA         A                AUUUA    ---U  ----CU   U      GGAU GUUGAUGUG  A AUUAGCAC UU AGUG CUAAUA  U  UAUUUUUUU UUGACUUUUGACUAAA     GGGA    CU      CUA A      |||| |||||||||  | |||||||| || |||| ||||||  |  ||||||||| ||||||||||||||||     ||||    ||      |||      CCUA CAACUACAC  U UAAUCGUG AA UUAC GAUUGU  A  AUGAAAAAA AACUGAAAACUGAUUU     CCCU    GA      GAU A AUUCC    -         UG A        C  C    A      AA CC         C                --CAA    UUUU  AAAUUU   U |
Stem-loop sequence | ACGGAUUGUUGAUGUGGUACAUUAGCACAUUAAGUGACUAAUACGUAAUAUUUUUUUAUUGACUUUUGACUAAAAUUUAGGGAUCUCUCUAUAAUUAGUUUAAAAGUUUUUCCCAACUUUAGUCAAAAGUCAACAAAAAAGUACCAAAUGUUAGACAUUCAACGUGCUAAUAUGUCACAUCAACAUCCCCUUA |