ncRNA ID | novel_gar_miR948 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr7:39341831-39341959 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CGACUGACAACUUGUGUGAGCAGA - 24 |
Stem-loop(if miRNA) |
UCCA     ---     -  UG   CU      -C    -    A     GU  U    UU     -   A     UGUUU   CAGGU GU  GUC  GAAUGU  CUAU UGGU GCUGA  UC GACA  AGUUG CAG U     |||||   ||||| ||  |||  ||||||  |||| |||| |||||  || ||||  ||||| |||     ACGAG   GUUCA CA  CAG  CUUACA  GAUG AUCA CGACU  AG CUGU  UCGAC GUU A --AG     UGU     A  GU   -C      UC    U    -     --  U    --     A   C |
Stem-loop sequence | UCCAUGUUUCAGGUGUUGGUCCUGAAUGUCCUAUUGGUAGCUGAGUUCUGACAUUAGUUGCAGAUACUUGACAGCUUGUCUGAUCAGCACUAUGUAGCUACAUUCCGACUGACAACUUGUGUGAGCAGA |