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BaseInfo

ncRNA ID novel_gar_miR948
Species Gossypium arboreum
Class miRNA
Genome position Chr7:39341831-39341959 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588
Length 24
Mature sequence(if miRNA) 1 - CGACUGACAACUUGUGUGAGCAGA - 24
Stem-loop(if miRNA) UCCA     ---     -  UG   CU      -C    -    A     GU  U    UU     -   A
    UGUUU   CAGGU GU  GUC  GAAUGU  CUAU UGGU GCUGA  UC GACA  AGUUG CAG U
    |||||   ||||| ||  |||  ||||||  |||| |||| |||||  || ||||  ||||| |||
    ACGAG   GUUCA CA  CAG  CUUACA  GAUG AUCA CGACU  AG CUGU  UCGAC GUU A
--AG     UGU     A  GU   -C      UC    U    -     --  U    --     A   C
Stem-loop sequence UCCAUGUUUCAGGUGUUGGUCCUGAAUGUCCUAUUGGUAGCUGAGUUCUGACAUUAGUUGCAGAUACUUGACAGCUUGUCUGAUCAGCACUAUGUAGCUACAUUCCGACUGACAACUUGUGUGAGCAGA