Search result

BaseInfo

ncRNA ID novel_gar_miR943
Species Gossypium arboreum
Class miRNA
Genome position Chr7:48061443-48061624 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588
Length 24
Mature sequence(if miRNA) 1 - AUUGGAAAUUGAUACAGUUGACGU - 24
Stem-loop(if miRNA) --    U  A    C                             C                                AAAAAUCAUAUCCA
  GUCA CU UAUC AUUUCUAAUAGUUUUAUGCCACAUCAGUA UCUUAUCCUGAAUUUCAGGAUUUUAUCCUGAA              A
  |||| || |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
  CAGU GA AUAG UAAAGGUUAUCAAAAUACGGUGUAGUCAU AGAAUAGGAUUUAAAGUCCUAAAAUAGGACUU              A
UG    U  C    U                             A                                AAAAUCAUAAAAUU
Stem-loop sequence GUCAUCUAUAUCCAUUUCUAAUAGUUUUAUGCCACAUCAGUACUCUUAUCCUGAAUUUCAGGAUUUUAUCCUGAAAAAAAUCAUAUCCAAAUUAAAAUACUAAAAUUCAGGAUAAAAUCCUGAAAUUUAGGAUAAGAAUACUGAUGUGGCAUAAAACUAUUGGAAAUUGAUACAGUUGACGU