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BaseInfo

ncRNA ID novel_gar_miR940
Species Gossypium arboreum
Class miRNA
Genome position Chr7:60997750-60997942 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588
Length 24
Mature sequence(if miRNA) 170 - UAAAGGUCAAGGCUUUUAACGGCG - 193
Stem-loop(if miRNA) ---U       AA        A        GUGGGAA                 AA                 GUGGGAAAAGCGCCGCUAAAGGUC
    AAAGGUC  GGCUUUUA CGGCGUUU       AAGCGCCGCUAAAGGUC  GGCUUUUAGCGGCGUUU                        A
    |||||||  |||||||| ||||||||       |||||||||||||||||  |||||||||||||||||
    UUUUCGG  CUGGAAAU GCCGCGAA       UUUGCGGCGAUUUUCGG  CUGGAAAUCGCCGCGAA                        A
CGAU       AA        C        AAGAGUG                 AA                 AAGGGUGUUUGCGGCGAUUUUCGG
Stem-loop sequence UAAAGGUCAAGGCUUUUAACGGCGUUUGUGGGAAAAGCGCCGCUAAAGGUCAAGGCUUUUAGCGGCGUUUGUGGGAAAAGCGCCGCUAAAGGUCAAGGCUUUUAGCGGCGUUUGUGGGAAAAGCGCCGCUAAAGGUCAAGGCUUUUAGCGGCGUUUGUGAGAAAAGCGCCGCUAAAGGUCAAGGCUUUUUAGC