ncRNA ID | novel_gar_miR940 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr7:60997750-60997942 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588 |
Length | 24 |
Mature sequence(if miRNA) | 170 - UAAAGGUCAAGGCUUUUAACGGCG - 193 |
Stem-loop(if miRNA) |
---U       AA        A        GUGGGAA                 AA                 GUGGGAAAAGCGCCGCUAAAGGUC     AAAGGUC  GGCUUUUA CGGCGUUU       AAGCGCCGCUAAAGGUC  GGCUUUUAGCGGCGUUU                        A     |||||||  |||||||| ||||||||       |||||||||||||||||  |||||||||||||||||     UUUUCGG  CUGGAAAU GCCGCGAA       UUUGCGGCGAUUUUCGG  CUGGAAAUCGCCGCGAA                        A CGAU       AA        C        AAGAGUG                 AA                 AAGGGUGUUUGCGGCGAUUUUCGG |
Stem-loop sequence | UAAAGGUCAAGGCUUUUAACGGCGUUUGUGGGAAAAGCGCCGCUAAAGGUCAAGGCUUUUAGCGGCGUUUGUGGGAAAAGCGCCGCUAAAGGUCAAGGCUUUUAGCGGCGUUUGUGGGAAAAGCGCCGCUAAAGGUCAAGGCUUUUAGCGGCGUUUGUGAGAAAAGCGCCGCUAAAGGUCAAGGCUUUUUAGC |