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BaseInfo

ncRNA ID novel_gar_miR939
Species Gossypium arboreum
Class miRNA
Genome position Chr7:61111616-61111812 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588
Length 24
Mature sequence(if miRNA) 1 - UCUUCAGCUGUUGGCGUUUGAGUG - 24
Stem-loop(if miRNA) --                                                                                         A   CUA
  CUCAAACGCCAACAGCUGAAGAUUUGCUUUACUUUAUGUCUAAUUAUAGUUUGUUUGAUAUGUGAGUCAUGUGUAUAUGAUCUUAUCUU AGA   U
  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||   U
  GAGUUUGCGGUUGUCGACUUCUGAACGAAAUGAAAUACAGAUUAAUAUCAAACAAACUAUACACUCAGUACACAUAUACUAGAAUAGAA UCU   A
GU                                                                                         G   AUG
Stem-loop sequence CUCAAACGCCAACAGCUGAAGAUUUGCUUUACUUUAUGUCUAAUUAUAGUUUGUUUGAUAUGUGAGUCAUGUGUAUAUGAUCUUAUCUUAAGACUAUUAGUAUCUGAAGAUAAGAUCAUAUACACAUGACUCACAUAUCAAACAAACUAUAAUUAGACAUAAAGUAAAGCAAGUCUUCAGCUGUUGGCGUUUGAGUG