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BaseInfo

ncRNA ID	ath-miRf11034-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	25
Mature sequence(if miRNA)	NA - GAGAGGAGAGAUAGCGUCGGGUAAU - NA
Stem-loop(if miRNA)	AG       AG  UC   UA    -    UCC     ----     GA   --U  UUACGAUUAGUUCUAGUG GGAGUCAGAG  GAGAGAU  CG  GGG  AUGA CAUC   GGAGA    GUCGC  UGG   GC                  G ||||||||||  |||||||  ||  |||  |||| ||||   |||||    |||||  |||   ||                  C UCUUAGUUUU  CUCUUUG  GC  UCU  UGCU GUAG   CUUCU    CAUCU  CUU   AG                  A           -G       --  UU   UC    A    -UU     UCUU     --   ACA  GAGUCUAAGGAGGUGUUU
Stem-loop sequence	GGAGUCAGAGAGGAGAGAUAGCGUCGGGUAAUGACAUCUCCGGAGAGUCGCGAUGGUGCUUACGAUUAGUUCUAGUGGCAUUUGUGGAGGAAUCUGAGGAACAUUCUCUACUUCUUCUUCUUGAUGAUCGUCUUCUUUCGGUUUCUCGUUUUGAUUCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AY247814.1	ncRNA:25   UAAUGGGCUGCGAUAGAGAGGAGAG   1   ||||||||||||||||||||||||| targets:740   AUUACCCGACGCUAUCUCUCCUCUC   764 Target Full Sequence	0.0	Arabidopsis thaliana hypothetical protein (At2g29600/F16P2.2) mRNA, complete cds	NA	coding protein	psRNATarget
NM_128513.2	ncRNA:25   UAAUGGGCUGCGAUAGAGAGGAGAG   1   ||||||||||||||||||||||||| targets:740   AUUACCCGACGCUAUCUCUCCUCUC   764 Target Full Sequence	0.0	Arabidopsis thaliana Galactose oxidase/kelch repeat superfamily protein mRNA	Galactose oxidase/kelch repeat superfamily protein(AT2G29600)	coding protein	psRNATarget
AY219120.1	ncRNA:25   UAAUGGGCUGCGAUAGAGAGGAGAG   1   ||||||||||||||||||||||||| targets:157   AUUACCCGACGCUAUCUCUCCUCUC   181 Target Full Sequence	0.0	Arabidopsis thaliana hypothetical protein (At2g29770/T27A16.13) mRNA, complete cds	NA	coding protein	psRNATarget
NM_128531.2	ncRNA:25   UAAUGGGCUGCGAUAGAGAGGAGAG   1   ||||||||||||||||||||||||| targets:157   AUUACCCGACGCUAUCUCUCCUCUC   181 Target Full Sequence	0.0	Arabidopsis thaliana Galactose oxidase/kelch repeat superfamily protein mRNA	Galactose oxidase/kelch repeat superfamily protein(AT2G29770)	coding protein	psRNATarget
NM_128534.2	ncRNA:25   UAAUGGGCUGCGAUAGAGAGGAGAG   1   |||||||||*||||||||||||||| targets:236   AUUACCCGAAGCUAUCUCUCCUCUC   260 Target Full Sequence	1.0	Arabidopsis thaliana Galactose oxidase/kelch repeat superfamily protein partial mRNA	Galactose oxidase/kelch repeat superfamily protein(AT2G29800)	coding protein	psRNATarget
NM_128532.2	ncRNA:25   UAAUGGGCUGCGAUAGAGAGGAGAG   1   ||||||||*|||||||||||||||| targets:191   AUUACCCGUCGCUAUCUCUCCUCUC   215 Target Full Sequence	1.0	Arabidopsis thaliana Galactose oxidase/kelch repeat superfamily protein partial mRNA	Galactose oxidase/kelch repeat superfamily protein(AT2G29780)	coding protein	psRNATarget
NM_001124942.1	ncRNA:25   UAAUGGGCUGCGAUAGAGAGGAGAG   1   ||||||||*|||||||||||||||| targets:191   AUUACCCGUCGCUAUCUCUCCUCUC   215 Target Full Sequence	1.0	Arabidopsis thaliana Galactose oxidase/kelch repeat superfamily protein partial mRNA	Galactose oxidase/kelch repeat superfamily protein(AT2G29780)	coding protein	psRNATarget
NM_128540.1	ncRNA:25   UAAUGGGCUGCGAUAGAGAGGAGAG   1   ||||||||*|||||||||||||||| targets:116   AUUACCCGUCGCUAUCUCUCCUCUC   140 Target Full Sequence	1.0	Arabidopsis thaliana Galactose oxidase/kelch repeat superfamily protein partial mRNA	Galactose oxidase/kelch repeat superfamily protein(AT2G29860)	coding protein	psRNATarget
NM_001036408.3	ncRNA:25   UAAU--GGGCUGCGAUAGAGAGGAGAG   1   ||||--|||||||||*||||||||||= targets:64   AUUAAGCCCGACGCUCUCUCUCCUCUU   90 Target Full Sequence	2.5	Arabidopsis thaliana transcription activator (GRL), mRNA	transcription activator(GRL)	coding protein	psRNATarget
AY496700.1	ncRNA:25   UAAU--GGGCUGCGAUAGAGAGGAGAG   1   ||||--|||||||||*||||||||||= targets:23   AUUAAGCCCGACGCUCUCUCUCCUCUU   49 Target Full Sequence	2.5	Arabidopsis thaliana ARP2/3 regulatory protein subunit NAPP mRNA, complete cds	NA	coding protein	psRNATarget
NM_128535.1	ncRNA:25   UAAUGGGCUGCGAUAGAGAGGAGAG   1   |*|||||||*||||||||||*|||| targets:152   ACUACCCGAAGCUAUCUCUCAUCUC   176 Target Full Sequence	2.5	Arabidopsis thaliana Galactose oxidase/kelch repeat superfamily protein partial mRNA	Galactose oxidase/kelch repeat superfamily protein(AT2G29810)	coding protein	psRNATarget