ncRNA ID | novel_gar_miR932 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr2:81386340-81386413 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029586 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGUGACUAUGAUGUAGAUAGACAG - 24 |
Stem-loop(if miRNA) |
--   G   AU    UAGAU      U      --A G   AGU ACU  GAUG     AGACAG UUAUUU   U A   ||| |||  ||||     |||||| ||||||   |   UCA UGA  UUGU     UUUGUU AAUAAA   G A AG   G   AU    UUAGU      U      GUA A |
Stem-loop sequence | AGUGACUAUGAUGUAGAUAGACAGUUUAUUUAUGAAAGAUGAAAUAAUUUGUUUUGAUUUGUUUAAGUGACUGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017772710.1 |
|
2.5 | PREDICTED: Gossypium arboreum two-component response regulator ARR12-like (LOC108471118), mRNA | two-component response regulator ARR12-like(LOC108471118) | coding protein | psRNATarget | |||||||||
XM_017788626.1 |
|
3.0 | PREDICTED: Gossypium arboreum pentatricopeptide repeat-containing protein At5g04780 (LOC108484723), mRNA | pentatricopeptide repeat-containing protein At5g04780(LOC108484723) | coding protein | psRNATarget |