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BaseInfo

ncRNA ID novel_gar_miR931
Species Gossypium arboreum
Class miRNA
Genome position Chr7:15442560-15442647 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588
Length 24
Mature sequence(if miRNA) 65 - UCUGUAUAUGAGCAUGUUAUGCAU - 88
Stem-loop(if miRNA)    -    UC   C UG    -    AC  -        A  UGU
GUG AUAG  UGC U  UGUA GGAU  CA AUAUGUAC UA   U
||| ||||  ||| |  |||| ||||  || |||||||| ||
UAC UAUU  ACG A  AUAU UCUA  GU UAUAUAUG AU   C
   G    GU   - GU    G    GU  A        A  UGU
Stem-loop sequence GUGAUAGUCUGCCUUGUGUAGGAUACCAAUAUGUACAUAUGUUCUGUUAAGUAUAUAUAUGUGAUCUGUAUAUGAGCAUGUUAUGCAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017758126.1
ncRNA:24   UACGUAUUGUACGAGUAUAUGUCU   1
  =***=*=|||||||||||||||||
targets:391   GACAGGGACAUGCUCAUAUACAGA   414

2.0 PREDICTED: Gossypium arboreum probable methyltransferase PMT15 (LOC108458723), mRNA probable methyltransferase PMT15(LOC108458723) coding protein psRNATarget