Search result

BaseInfo

ncRNA ID ath-miRf11033-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 22
Mature sequence(if miRNA) NA - GCUGUGGCAUCAUCAAGAUUCA - NA
Stem-loop(if miRNA)        ---    C  UG               A   CUG   AUGGACGGUGGUGAUUCA
GUUGUUG   GCUG UG  GCAUCAUCAAGAUUC CAU   UUG                  C
|||||||   |||| ||  ||||||||||||||| |||   |||
CAGCAAC   CGGC AC  CGUAGUAGUUCUAAG GUA   AAG                  U
       UAA    U  GU               A   --A   UAUCUCUUGAAACACCUC
Stem-loop sequence GUUGUUGGCUGCUGUGGCAUCAUCAAGAUUCACAUCUGUUGAUGGACGGUGGUGAUUCACUCUCCACAAAGUUCUCUAUGAAAAUGAGAAUCUUGAUGAUGCUGCAUCGGCAAUCAACGAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001338032.1
ncRNA:22   ACUUAGAACUACUACGGUGUCG   1
  |||*|||||||||*||||||||
targets:3650   UGAUUCUUGAUGAAGCCACAGC   3671

2.5 Arabidopsis thaliana multidrug resistance-associated protein 7 (ABCC7), mRNA multidrug resistance-associated protein 7(ABCC7) coding protein psRNATarget
AJ507129.1
ncRNA:22   ACUUAGAACUACUACGGUGUCG   1
  |||*|||||||||*||||||||
targets:4196   UGAUUCUUGAUGAAGCCACAGC   4217

2.5 Arabidopsis thaliana mRNA for multidrug-resistance related protein (mrp7 gene) NA coding protein psRNATarget
NM_112149.4
ncRNA:22   ACUUAGAACUACUACGGUGUCG   1
  |||*|||||||||*||||||||
targets:4553   UGAUUCUUGAUGAAGCCACAGC   4574

2.5 Arabidopsis thaliana multidrug resistance-associated protein 7 (ABCC7), mRNA multidrug resistance-associated protein 7(ABCC7) coding protein psRNATarget
AY052368.1
ncRNA:22   ACUUAGAACUACUACGGUGUCG   1
  ||=*|||||||||*||||||||
targets:4130   UGGUUCUUGAUGAAGCCACAGC   4151

2.5 Arabidopsis thaliana ATP-binding cassette transporter MRP6 mRNA, complete cds NA coding protein psRNATarget
NM_112148.4
ncRNA:22   ACUUAGAACUACUACGGUGUCG   1
  ||=*|||||||||*||||||||
targets:4220   UGGUUCUUGAUGAAGCCACAGC   4241

2.5 Arabidopsis thaliana multidrug resistance-associated protein 8 (ABCC6), mRNA multidrug resistance-associated protein 8(ABCC6) coding protein psRNATarget