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BaseInfo

ncRNA ID	novel_gar_miR912
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr6:68758171-68758343 [+]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR1029588
Length	24
Mature sequence(if miRNA)	150 - AAAGGGAUACAGAUGACAUGGCGU - 173
Stem-loop(if miRNA)	--                        -                                          U      A      UUUA   GCCAUGUCAUUUGUAUCCCUUUUC AAUAGUUUUAUGCCACAUCGGUAUUCUUAUCUUGAAUUUCAG AUUUUA UUUGGA    A   |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||   CGGUACAGUAGACAUAGGGAAAAG UUAUCAAAAUACGGUGUAGUUAUGAGAAUAGAACUUAAAGUC UAAAAU GGACUU    U UG                        G                                          C      A      UUUU
Stem-loop sequence	GCCAUGUCAUUUGUAUCCCUUUUCAAUAGUUUUAUGCCACAUCGGUAUUCUUAUCUUGAAUUUCAGUAUUUUAAUUUGGAUUUAAUUUUUUUCAGGAUAAAAUCCUGAAAUUCAAGAUAAGAGUAUUGAUGUGGCAUAAAACUAUUGGAAAAGGGAUACAGAUGACAUGGCGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017758885.1	ncRNA:24   UGCGGUACAGUAGACAUAGGGAAA   1   ||||||*||||||||||||||||| targets:1363   ACGCCACGUCAUCUGUAUCCCUUU   1386 Target Full Sequence	1.0	PREDICTED: Gossypium arboreum enolase-like (LOC108459500), mRNA	enolase-like(LOC108459500)	coding protein	psRNATarget
XM_017758885.1	ncRNA:24   UGCGGUACAGUAGACAUAGGGAAA   1   ||||||*||||||||||||||||| targets:1632   ACGCCACGUCAUCUGUAUCCCUUU   1655 Target Full Sequence	1.0	PREDICTED: Gossypium arboreum enolase-like (LOC108459500), mRNA	enolase-like(LOC108459500)	coding protein	psRNATarget
XM_017759563.1	ncRNA:24   UGCGGUACAGUAGACAUAGGGAAA   1   ||||||*||||||||||||||||| targets:2364   ACGCCACGUCAUCUGUAUCCCUUU   2387 Target Full Sequence	1.0	PREDICTED: Gossypium arboreum L-type lectin-domain containing receptor kinase IX.1-like (LOC108460187), mRNA	L-type lectin-domain containing receptor kinase IX.1-like(LOC108460187)	coding protein	psRNATarget
XM_017756176.1	ncRNA:24   UGCGGUACAGUAGACAUAGGGAAA   1   |||=||*||||||||||||||||| targets:669   ACGUCACGUCAUCUGUAUCCCUUU   692 Target Full Sequence	1.0	PREDICTED: Gossypium arboreum uncharacterized LOC108457229 (LOC108457229), mRNA	uncharacterized LOC108457229(LOC108457229)	coding protein	psRNATarget