| ncRNA ID | novel_gar_miR907 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr2:66886386-66886606 [+] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR1029586 |
| Length | 21 |
| Mature sequence(if miRNA) | 201 - UAUAGGGACUAAUUUGUCUAU - 221 |
| Stem-loop(if miRNA) |
-- CUAC G GC CUA U U AUUCAU G --A CU AGA -A A AGGCAAAUUAGUCCCU ACAUUAGAUUAAA A AAA G UCUUUCAGUU AAAA UCAUUUCUA UGUUAAAAACUGGC UGG GAU AUA CCA A |||||||||||||||| ||||||||||||| | ||| | |||||||||| |||| ||||||||| |||||||||||||| ||| ||| ||| ||| U UCUGUUUAAUCAGGGA UGUAAUCUAAUUU U UUU C AGGAAGUUAA UUUU GGUAAAGAU AUAAUUUUUGACCG AUC UUG UGU GGU A UA --UA G -A -AA C - GAAAAU A GGG AU --G AC G |
| Stem-loop sequence | AGGCAAAUUAGUCCCUCUACACAUUAGAUUAAAGAGCAAACUAGUUCUUUCAGUUUAAAAAUUCAUUCAUUUCUAGUGUUAAAAACUGGCAUGGCUGAUAGAAUAACCAAAUAGUGGCAUGUGGUUUACUAGGGGCCAGUUUUUAAUAAUAGAAAUGGUAAAAGUUUUAAUUGAAGGACCAAUUUAUGUUUAAUCUAAUGUAUAGGGACUAAUUUGUCUAU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017761048.1 |
|
1.5 | PREDICTED: Gossypium arboreum heat shock factor protein HSF8-like (LOC108461261), mRNA | heat shock factor protein HSF8-like(LOC108461261) | coding protein | psRNATarget | |||||||||
| XM_017784200.1 |
|
2.5 | PREDICTED: Gossypium arboreum pentatricopeptide repeat-containing protein At5g13270, chloroplastic (LOC108481035), mRNA | pentatricopeptide repeat-containing protein At5g13270, chloroplastic(LOC108481035) | coding protein | psRNATarget |