ncRNA ID | novel_gar_miR903 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr6:28291164-28291378 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588 |
Length | 24 |
Mature sequence(if miRNA) | 192 - UGAGGGACCUGUGGAUGCCUAAAG - 215 |
Stem-loop(if miRNA) |
--UC       UG                  GG      ----   A        A    G    U           C        AA     A      --     UAC     GGGUAUC  UAGGUCUCUUAAGGUUUU  CACCCU    UGC CCUCCAUA AUUU AACC GCAUCCUCACA ACAAAGGA  GUACU UGUAGA  AGAUA   C     |||||||  ||||||||||||||||||  ||||||    ||| |||||||| |||| |||| ||||||||||| ||||||||  ||||| ||||||  |||||   A     UCCGUAG  GUCCAGGGAGUUCCAAAA  GUGGGA    ACG GGAGGUGU UAAG UUGG UGUAGGAGUGU UGUUUUCU  CGUGA AUGUCU  UCUAU   A GAAA       GU                  GG      GUUC   A        C    G    C           A        CA     G      UG     CUA |
Stem-loop sequence | UCGGGUAUCUGUAGGUCUCUUAAGGUUUUGGCACCCUUGCACCUCCAUAAAUUUGAACCUGCAUCCUCACACACAAAGGAAAGUACUAUGUAGAAGAUAUACCAAAUCUAUCUGUUCUGUAGAGUGCACUCUUUUGUAUGUGAGGAUGUCGGUUGGAAUCUGUGGAGGAGCACUUGAGGGUGGGAAAACCUUGAGGGACCUGUGGAUGCCUAAAG |