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BaseInfo

ncRNA ID novel_gar_miR902
Species Gossypium arboreum
Class miRNA
Genome position Chr6:3495254-3495340 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588;SRR1029586
Length 24
Mature sequence(if miRNA) 1 - CGGCUGUCUGUAUAUGGUCGAAGA - 24
Stem-loop(if miRNA) --        C  A     G    --UG  AUGGAGAAUAGAUUU
  UUUGAUUA UA AUAGA AGCU    UC               C
  |||||||| || ||||| ||||    ||
  AAGCUGGU AU UGUCU UCGG    AC               U
AG        -  A     G    CGUA  AGGAGGUGAAGUAGU
Stem-loop sequence UUUGAUUACUAAAUAGAGAGCUUGUCAUGGAGAAUAGAUUUCUUGAUGAAGUGGAGGACAAUGCGGCUGUCUGUAUAUGGUCGAAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017794441.1
ncRNA:24   AGAAGCUGGUAUAUGUCUGUCGGC   1
  ||||=|=*=|||||||||||||||
targets:919   UCUUUGGGUAUAUACAGACAGCCG   942

3.0 PREDICTED: Gossypium arboreum uncharacterized LOC108489730 (LOC108489730), mRNA uncharacterized LOC108489730(LOC108489730) coding protein psRNATarget