ncRNA ID | novel_gar_miR899 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr6:20609292-20609413 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588 |
Length | 24 |
Mature sequence(if miRNA) | 99 - UAGUGGAUGAUAGUGGCAUGACAU - 122 |
Stem-loop(if miRNA) |
--U  U            C    C       GUAA     GAAUUUU     GG       UG U    AG GGAUGAUAGUGG AUGA AUUUGGU    UUAUU       UUUAA  UUAAUUA  G A    || |||||||||||| |||| |||||||    |||||       |||||  |||||||  |    UC UCUACUAUUACC UAUU UAAACCA    AAUAA       AAAUU  AAUUAAU  U A ACC  U            U    U       ---A     ----AAU     -A       GU U |
Stem-loop sequence | UAGUGGAUGAUAGUGGCAUGACAUUUGGUGUAAUUAUUGAAUUUUUUUAAGGUUAAUUAUGGUAAUUUGUAAUUAAAUUAAAUAAAAUAAAACCAAAUUUUAUUCCAUUAUCAUCUUCUCCA |