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BaseInfo

ncRNA ID	ath-miRf11030-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - AUUGUGGUUUCUUCUCUGGA - NA
Stem-loop(if miRNA)	A  G   U             -AC     UU  GA CCG UU UGG UUCUUCUCUGGAG   UAGCU  AC  U ||| || ||| |||||||||||||   |||||  ||  C GGC AA AUU AAGAAGAGGCCUU   AUCGA  UG  A    -  G   U             GUC     UU  GC
Stem-loop sequence	CCGAUUGUGGUUUCUUCUCUGGAGACUAGCUUUACGAUCACGGUUUAGCUACUGUUCCGGAGAAGAAUUUAGAACGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK228778.1	ncRNA:20   AGGUCUCUUCUUUGGUGUUA   1   |||||||||||||||||||| targets:28   UCCAGAGAAGAAACCACAAU   47 Target Full Sequence	0.0	Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL16-10-B16	NA	coding protein	psRNATarget
NM_001336001.1	ncRNA:20   AGGUCUCUUCUUUGGUGUUA   1   |||||||||||||||||||| targets:164   UCCAGAGAAGAAACCACAAU   183 Target Full Sequence	0.0	Arabidopsis thaliana AFG1-like ATPase family protein partial mRNA	AFG1-like ATPase family protein(AT2G25530)	coding protein	psRNATarget
NM_128110.3	ncRNA:20   AGGUCUCUUCUUUGGUGUUA   1   |||||||||||||||||||| targets:164   UCCAGAGAAGAAACCACAAU   183 Target Full Sequence	0.0	Arabidopsis thaliana AFG1-like ATPase family protein partial mRNA	AFG1-like ATPase family protein(AT2G25530)	coding protein	psRNATarget
AK318716.1	ncRNA:20   AGGUCUCUUCUUUGGUGUUA   1   |||||||||||||||||||| targets:29   UCCAGAGAAGAAACCACAAU   48 Target Full Sequence	0.0	Arabidopsis thaliana AT2G25530 mRNA, complete cds, clone: RAFL07-53-G11	NA	coding protein	psRNATarget
NM_001341188.1	ncRNA:20   AGGUCUCUUCUUUGGUGUUA   1   |*|||||||||||||||||| targets:1494   UACAGAGAAGAAACCACAAU   1513 Target Full Sequence	1.0	Arabidopsis thaliana neurofilament heavy protein mRNA	neurofilament heavy protein(AT4G17000)	coding protein	psRNATarget
NM_117804.2	ncRNA:20   AGGUCUCUUCUUUGGUGUUA   1   |*|||||||||||||||||| targets:1575   UACAGAGAAGAAACCACAAU   1594 Target Full Sequence	1.0	Arabidopsis thaliana neurofilament heavy protein partial mRNA	neurofilament heavy protein(AT4G17000)	coding protein	psRNATarget
NM_001341189.1	ncRNA:20   AGGUCUCUUCUUUGGUGUUA   1   |*|||||||||||||||||| targets:1745   UACAGAGAAGAAACCACAAU   1764 Target Full Sequence	1.0	Arabidopsis thaliana neurofilament heavy protein mRNA	neurofilament heavy protein(AT4G17000)	coding protein	psRNATarget
BT029762.1	ncRNA:20   AGGUCUCUUCUUUGGUGUUA   1   **||||||||||*||||||| targets:970   AGCAGAGAAGAAUCCACAAU   989 Target Full Sequence	2.5	Arabidopsis thaliana At1g55915 mRNA, complete cds	NA	coding protein	psRNATarget
BX816686.1	ncRNA:20   AGGUCUCUUCUUUGGUGUUA   1   **||||||||||*||||||| targets:1023   AGCAGAGAAGAAUCCACAAU   1042 Target Full Sequence	2.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH62ZF08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
AK229104.1	ncRNA:20   AGGUCUCUUCUUUGGUGUUA   1   **||||||||||*||||||| targets:1086   AGCAGAGAAGAAUCCACAAU   1105 Target Full Sequence	2.5	Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL16-38-K05	NA	coding protein	psRNATarget
NM_104469.4	ncRNA:20   AGGUCUCUUCUUUGGUGUUA   1   **||||||||||*||||||| targets:1086   AGCAGAGAAGAAUCCACAAU   1105 Target Full Sequence	2.5	Arabidopsis thaliana zinc ion binding protein mRNA	zinc ion binding protein(AT1G55915)	coding protein	psRNATarget
NM_001333743.1	ncRNA:20   AGGUCUCUUCUUUGGUGUUA   1   **||||||||||*||||||| targets:1093   AGCAGAGAAGAAUCCACAAU   1112 Target Full Sequence	2.5	Arabidopsis thaliana zinc ion binding protein mRNA	zinc ion binding protein(AT1G55915)	coding protein	psRNATarget
NM_001333745.1	ncRNA:20   AGGUCUCUUCUUUGGUGUUA   1   **||||||||||*||||||| targets:1152   AGCAGAGAAGAAUCCACAAU   1171 Target Full Sequence	2.5	Arabidopsis thaliana zinc ion binding protein mRNA	zinc ion binding protein(AT1G55915)	coding protein	psRNATarget
NM_001333744.1	ncRNA:20   AGGUCUCUUCUUUGGUGUUA   1   **||||||||||*||||||| targets:1156   AGCAGAGAAGAAUCCACAAU   1175 Target Full Sequence	2.5	Arabidopsis thaliana zinc ion binding protein mRNA	zinc ion binding protein(AT1G55915)	coding protein	psRNATarget
BX817884.1	ncRNA:20   AGGUCUCUUCUUUGGUGUUA   1   *=|=|||||||||||||||* targets:109   AUCGGAGAAGAAACCACAAG   128 Target Full Sequence	3.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL47ZE03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget